Here is a list of all documented class members with links to the class documentation for each member:
- p -
- packingScore() : loos::AtomicGroup
- pad : loos::OptionsFramework::BasicWater
- paramSize() : ENM::BoundSuperBlock, ENM::ConstBonded, ENM::DistanceCutoff, ENM::DistanceWeight, ENM::ElasticNetworkModel, ENM::ExponentialDistance, ENM::HCA, ENM::SpringFunction, ENM::SuperBlock
- parse() : loos::OptionsFramework::AggregateOptions, loos::Parser, loos::ParserDriver
- parseFrame() : loos::AmberRst, loos::AmberTraj, loos::CCPDB, loos::DCD, loos::MDTrajTraj, loos::PDBTraj, loos::TinkerArc, loos::Trajectory, loos::TRR
- ParserDriver() : loos::ParserDriver
- PDB() : loos::PDB
- PDBTraj() : loos::PDBTraj
- periodicBox() : loos::AmberNetcdf, loos::AmberRst, loos::AmberTraj, loos::AtomicGroup, loos::CCPDB, loos::DCD, loos::MDTrajTraj, loos::MultiTrajectory, loos::PDBTraj, loos::TinkerArc, loos::Trajectory, loos::TRR, loos::XTC
- perturbCoords() : loos::AtomicGroup
- plus() : loos::Fmt
- pop() : loos::XForm
- postConditions() : loos::OptionsFramework::BasicConvergence, loos::OptionsFramework::BasicWater, loos::OptionsFramework::OptionsPackage, ToolOptions
- precision() : loos::Fmt, loos::XTC
- prefix() : ENM::ElasticNetworkModel
- premult() : loos::XForm
- principalAxes() : loos::AtomicGroup
- principalAxesOrder() : loos::AtomicGroup
- print() : loos::OptionsFramework::AggregateOptions, loos::OptionsFramework::BasicConvergence, loos::OptionsFramework::BasicWater, loos::OptionsFramework::OptionsPackage, ToolOptions
- printBackboneAtoms() : loos::RnaSuite
- printBackboneDihedrals() : loos::RnaSuite
- printReferenceSuites() : loos::RnaSuite
- printSuites() : loos::RnaSuite
- pruneBonds() : loos::AtomicGroup
- push() : loos::Kernel, loos::XForm
- push_back() : loos::LineReader