• LOOS USER TOOL TEMPLATES *

This directory contains some tool-templates designed to make writing new tools with LOOS easier. Pick the tool-template that is closest to what you need, then copy it into a new file and look for the regions marked "***EDIT***". Finally, add your tool into the list of "apps" in the SConscript file. You can now build your tool alongside LOOS. In the top-level LOOS directory, type "scons user". This will build the LOOS library and everything in the user packages directory.

Templates:

• model_calc.cpp *

Calculates a statistic from a single structure. Supports command-line options using the LOOS OptionsFramework infrastructure.

• simple_model_calc.cpp *

Calculates a statistic from a single structure using a very simple command-line format.

• simple_model_transform.cpp *

Performs a transformation of a single structure. The new structure is written to standard out as a PDB. A very simple command-line format is used.

• traj_cal.cpp *

Calculates a statistic from a single structure. Command-line options using the LOOS OptionsFramework infrastructure is supported.

• traj_transform.cpp *

Performs a transformation of a single structure. The new structure is written to standard out as a PDB. Command-line options using the LOOS OptionsFramework infrastructure is supported.