loos::DensityTools::WaterFilterDecorator Class Reference

Decorator base class for "decorating" the core water filters... More...

#include <internal-water-filter.hpp>

Inheritance diagram for loos::DensityTools::WaterFilterDecorator:

Collaboration diagram for loos::DensityTools::WaterFilterDecorator:

Public Member Functions
	WaterFilterDecorator (WaterFilterBase *p)
virtual std::string	name (void) const
	Just states the name of the filter/picker.
virtual double	volume (void)
	Calculate the volume of the region we can pick waters from...
virtual std::vector< int >	filter (const loos::AtomicGroup &solv, const loos::AtomicGroup &prot)
	Given a molecule and a set of waters, pick which waters are inside.
virtual std::vector< loos::GCoord >	boundingBox (const loos::AtomicGroup &prot)
	Calculate the appropriate bounding box (given the molecule)

Additional Inherited Members
Protected Attributes inherited from loos::DensityTools::WaterFilterBase
std::vector< loos::GCoord >	bdd_

Detailed Description

Decorator base class for "decorating" the core water filters...

Member Function Documentation

boundingBox()

virtual std::vector< loos::GCoord > loos::DensityTools::WaterFilterDecorator::boundingBox ( const loos::AtomicGroup & )

inlinevirtual

Calculate the appropriate bounding box (given the molecule)

Implements loos::DensityTools::WaterFilterBase.

Reimplemented in loos::DensityTools::ZClippedWaterFilter, and loos::DensityTools::BulkedWaterFilter.

filter()

virtual std::vector< int > loos::DensityTools::WaterFilterDecorator::filter ( const loos::AtomicGroup & , const loos::AtomicGroup &  )

inlinevirtual

Given a molecule and a set of waters, pick which waters are inside.

The result is a map of which waters are inside (1 = inside, 0 = not)

Implements loos::DensityTools::WaterFilterBase.

Reimplemented in loos::DensityTools::ZClippedWaterFilter, and loos::DensityTools::BulkedWaterFilter.

name()

virtual std::string loos::DensityTools::WaterFilterDecorator::name ( void ) const

inlinevirtual

Just states the name of the filter/picker.

Implements loos::DensityTools::WaterFilterBase.

Reimplemented in loos::DensityTools::ZClippedWaterFilter, and loos::DensityTools::BulkedWaterFilter.

volume()

virtual double loos::DensityTools::WaterFilterDecorator::volume ( void )

inlinevirtual

Calculate the volume of the region we can pick waters from...

Implements loos::DensityTools::WaterFilterBase.

Reimplemented in loos::DensityTools::ZClippedWaterFilter, and loos::DensityTools::BulkedWaterFilter.

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The documentation for this class was generated from the following file:

• Packages/DensityTools/internal-water-filter.hpp